Submission Details

Submitter:

Classification:
Definitive
GENCC:100001
Gene:
Disease:
A4GALT-congenital disorder of glycosylation
Mode Of Inheritance:
Autosomal recessive
Evaluated Date:
05/30/2025
Evidence/Notes:

A4GALT was first reported in relation to autosomal recessive congenital disorder of glycosylation in 2000 (Steffensen et al., PMID: 10747952). A4GALT-congenital disorder of glycosylation presents as the blood group phenotype p null. Persons affected with this condition may present with no phenotype beyond abnormal agglutination in standard blood group serological testing or may present with recurrent spontaneous abortion or congenital hemolytic anemia. Per criteria outlined by the ClinGen Lumping and Splitting guidelines, we found a difference in molecular mechanism. Therefore, the following disease entities have been split into multiple disease entities, congenital disorder of glycosylation and NOR polyagglutination syndrome. The split curation for autosomal recessive NOR polyagglutination syndrome will be curated separately. 14 variants (missense, in-frame indel, nonsense, frameshift) that have been reported in 13 probands in 6 publications (PMIDs: 12823750, 15142124, 10747952, 10993874, 11896312, 27612185) are included in this curation. More evidence is available in the literature, but the maximum score for genetic evidence (12 pts) has been reached. The mechanism of pathogenicity is known to be loss of function. This gene-disease relationship is also supported by in vitro functional assays. (PMIDs: 23927681, 18067504). In summary, there is definitive evidence supporting the relationship between A4GALT and autosomal recessive congenital disorder of glycosylation. This has been repeatedly demonstrated in both the research and clinical diagnostic settings and has been upheld over time. This classification was approved by the ClinGen Congenital Disorders of Glycosylation GCEP on the meeting date May 21, 2025 (SOP Version 11).

PubMed IDs:
10747952 10993874 11896312 12823750 15142124 18067504 23927681 27612185
Public Report:
Assertion Criteria:
Submitter Submitted Date:
12/05/2025

The GenCC data are available free of restriction under a CC0 1.0 Universal (CC0 1.0) Public Domain Dedication. The GenCC requests that you give attribution to GenCC and the contributing sources whenever possible and appropriate. The accepted Flagship manuscript is now available from Genetics in Medicine (https://www.gimjournal.org/article/S1098-3600(22)00746-8/fulltext).

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